USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: CRYL1_HUMAN USC-OGP 2-DE database:  CRYL1_HUMAN CRYL1_HUMAN General information about the entry View entry in simple text format Entry name CRYL1_HUMAN Primary accession number Q9Y2S2 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Lambda-crystallin homolog; EC=1.1.1.45; AltName: Full=L-gulonate 3-dehydrogenase; Short=Gul3DH;. Gene name Name=CRYL1 Synonyms=CRY Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0761: pI=5.33; Mw=32316 Cross-references UniProtKB/Swiss-Prot Q9Y2S2; CRYL1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name CRYL1_HUMAN Primary accession number Q9Y2S2 Secondary accession number(s) A0PJ43 B3KN92 Q0VDI1 Q7Z4Z9 Q9P0G7 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 136) Name and origin of the protein Description RecName: Full=Lambda-crystallin homolog; EC=1.1.1.45; AltName: Full=L-gulonate 3-dehydrogenase; Short=Gul3DH; Gene name Name=CRYL1 Synonyms=CRY Encoded on Name=CRYL1; Synonyms=CRY Keywords 3D-structure; Alternative splicing; Complete proteome; Cytoplasm; NAD; Oxidoreductase; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF077049; AAD27782.1; ALT_SEQ; mRNA EMBL AF087898; AAP97197.1; -; mRNA EMBL AF160216; AAF67017.1; -; mRNA EMBL AK024041; BAG51254.1; -; mRNA EMBL AL161715; CAH71074.1; -; Genomic_DNA EMBL AL590096; CAH71074.1; JOINED; Genomic_DNA EMBL AL590096; CAI14389.1; -; Genomic_DNA EMBL AL161715; CAI14389.1; JOINED; Genomic_DNA EMBL AL161715; CAH71073.1; -; Genomic_DNA EMBL AL590096; CAH71073.1; JOINED; Genomic_DNA EMBL AL590096; CAI14388.1; -; Genomic_DNA EMBL AL161715; CAI14388.1; JOINED; Genomic_DNA EMBL CH471075; EAX08259.1; -; Genomic_DNA EMBL CH471075; EAX08260.1; -; Genomic_DNA EMBL BC008562; AAH08562.2; -; mRNA EMBL BC071810; AAH71810.1; -; mRNA EMBL BC119660; AAI19661.2; -; mRNA EMBL BC119661; AAI19662.2; -; mRNA CCDS CCDS41871.1; -. [Q9Y2S2-1]; . RefSeq NP_057058.2; NM_015974.2. [Q9Y2S2-1]; . UniGene Hs.370703; -; . PDB 3F3S; X-ray; 2.00 A; A/B=6-316 PDBsum 3F3S; -; . ProteinModelPortal Q9Y2S2; -; . SMR Q9Y2S2; -; . BioGrid 119274; 36; . IntAct Q9Y2S2; 2; . MINT MINT-5005752; -; . STRING 9606.ENSP00000298248; -; . iPTMnet Q9Y2S2; -; . PhosphoSitePlus Q9Y2S2; -; . BioMuta CRYL1; -; . DMDM 93141249; -; . OGP Q9Y2S2; -; . REPRODUCTION-2DPAGE IPI00645031; -; . PaxDb Q9Y2S2; -; . PeptideAtlas Q9Y2S2; -; . PRIDE Q9Y2S2; -; . Ensembl ENST00000298248; ENSP00000298248; ENSG00000165475. [Q9Y2S2-1]; . Ensembl ENST00000382812; ENSP00000372262; ENSG00000165475. [Q9Y2S2-2]; . GeneID 51084; -; . KEGG hsa:51084; -; . UCSC uc001ung.4; human. [Q9Y2S2-1]; . CTD 51084; -; . DisGeNET 51084; -; . GeneCards CRYL1; -; . HGNC HGNC:18246; CRYL1; . HPA HPA040403; -; . MIM 609877; gene; . neXtProt NX_Q9Y2S2; -; . OpenTargets ENSG00000165475; -; . PharmGKB PA26923; -; . eggNOG KOG2305; Eukaryota; . eggNOG COG1250; LUCA; . GeneTree ENSGT00390000007182; -; . HOGENOM HOG000141499; -; . HOVERGEN HBG051126; -; . InParanoid Q9Y2S2; -; . KO K13247; -; . OMA SWAMVFA; -; . OrthoDB EOG091G0IP3; -; . PhylomeDB Q9Y2S2; -; . TreeFam TF313501; -; . Reactome R-HSA-5661270; Catabolism of glucuronate to xylulose-5-phosphate; . SABIO-RK Q9Y2S2; -; . ChiTaRS CRYL1; human; . EvolutionaryTrace Q9Y2S2; -; . GenomeRNAi 51084; -; . PRO PR:Q9Y2S2; -; . Proteomes UP000005640; Chromosome 13; . Bgee ENSG00000165475; -; . CleanEx HS_CRYL1; -; . ExpressionAtlas Q9Y2S2; baseline and differential; . Genevisible Q9Y2S2; HS; . GO GO:0005829; C:cytosol; ISS:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0003857; F:3-hydroxyacyl-CoA dehydrogenase activity; IEA:InterPro; . GO GO:0050104; F:L-gulonate 3-dehydrogenase activity; IDA:UniProtKB; . GO GO:0070403; F:NAD+ binding; IDA:UniProtKB; . GO GO:0042803; F:protein homodimerization activity; IPI:UniProtKB; . GO GO:0006631; P:fatty acid metabolic process; IEA:InterPro; . GO GO:0019640; P:glucuronate catabolic process to xylulose 5-phosphate; TAS:Reactome; . Gene3D 1.10.1040.10; -; 1; . Gene3D 3.40.50.720; -; 1; . InterPro IPR022694; 3-OHacyl-CoA_DH; . InterPro IPR006180; 3-OHacyl-CoA_DH_CS; . InterPro IPR006176; 3-OHacyl-CoA_DH_NAD-bd; . InterPro IPR006108; 3HC_DH_C; . InterPro IPR008927; 6-PGluconate_DH_C-like; . InterPro IPR013328; 6PGD_dom_2; . InterPro IPR016040; NAD(P)-bd_dom; . Pfam PF00725; 3HCDH; 1; . Pfam PF02737; 3HCDH_N; 1; . PIRSF PIRSF000105; HCDH; 1; . SUPFAM SSF48179; SSF48179; 1; . SUPFAM SSF51735; SSF51735; 1; . PROSITE PS00067; 3HCDH; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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